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Species belonging to selected taxon:

Fundulus heteroclitus



ABOUT THIS RECORD

ID: MNEST009009
species: Fundulus heteroclitus
miRNA family: mir-24
source: miRNEST

Taxonomy by NCBI:
Fundulus heteroclitus Fundulus Fundulidae Cyprinodontoidei Cyprinodontiformes Atherinomorpha Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGCTCAGTTCAGCAGGAACAG

miRNA*
GTGCCTGCTGTGCTGATAATCAGT

mismatches: 3
bulges: 2

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pre-miRNA
CCCCTGTTGGGTCAGTCTCCTGTGCCTGCTGTGCTGATAATCAGTGTGTGACGTCGGCTGGCTCAGTTCAGCAGGAACAGGGGACTGTTCTCACTTCC

dot-bracket secondary structure
.......((((.(((((((((((.(((((((.(((((...(((((...........))))).))))).))))))).)))))))))))..)))).....


SIMILARITIES
miRBase fru-mir-24-2: 4e-37

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-24: 5e-31
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
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